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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846956.1_cds_XP_016509837.1_22738
CDS Infomation

[gene=LOC107827255] [db_xref=GeneID:107827255] [protein=putative transferase At1g60990, chloroplastic isoform X1] [protein_id=XP_016509837.1] [location=join(7805..8023,9228..9329,9574..9607,10033..10106,10198..10263,10357..10421,10559..10646,10756..10821,11720..11885,12079..12162,12228..12355,12666..12836)] [gbkey=CDS]
Sequence

ATGATTCGAGCGATGGCGTATTGCTACGGTGCCAGCGTGCTCTTTCCTTGTCAGTCCTTT
TCTTCCTCTCCCATTCTTCATCTCTTTCCCACTCCATTAGCTTACCGGCCGTTCAGTTAC
GATGCGCCGCCGACGAAGTTTAAGCGGCGGCTTTCTTTTTCTTCTGCAGCTGCGCTGCCT
TTCGACCTTTCTCCACCTCCCATTGACCACGACCTCCTCGATACTATGACTGTTGCTGGG
GCCAAGGTATCAGAAGATGGGGCAATAGGAACATTCGATAATGACGAGGAGGCACTAGAT
GCTGTTGAGAATGCAGTCGCGGTTGTGGATCTTTCACACTACGGCAGGATAAGAGTTAGT
GGAGAAGACAGGGTTCAGTTTCTTCACAACCAAAGTACTGCTAACTTTGAAATTCTTCAT
GAAGGGCAGGGATGTGACACTGTTTTTGTGACACCAACTGCCAGAACCATCGATATTGCC
CACGCCTGGATTATGAAAACTGCAATCACATTGGTGATCTCTCCAGTGACCAAGGAAAGA
ATAACTGGAATGCTTAAGAAGTACATATTCTTTGCAGACAAAGTTGAAATTCAAGATATT
ACAGGACAAACATCCTTGTTCGTACTAATAGGGCCTAGAAGTAACCAAATAATGGAAGCT
CTGAATCTTGCTGACGTAGTTGGACAACCATATGGCTCACATAAGCATTACAGTGTAAAT
GGAATGCCAATAACTGTGGGAGTGGGAAATATCATCTCTGATGAAGGTTACTCACTAATG
ATGTCTCCAGCTGCTGCTGAGTCGGTCTGGAAAGCTCTTCTAGGTCATGGGACCATCCCA
ATGGGTACTAATGCATGGGAAACTTTAAGGATACTTCAAGGAAGACCAGCTCCTGGGAAA
GAGCTCACTGATGAGTTTAATGTTCTGGAGGCTAATCTGTGGAATGCTGTTTCTCTGAAT
AAAGGGTGCTATAAGGGCCAAGAAACCATTTCTAGGCTTGTAACTTACGATGGCATCAAA
CAGAGGCTGTGGGGAATACGTGTATCATCGCCAGTGGAACCTGGCAGCACCATTTCAGTG
GACGGGAAAAAGGTTGGCAAGGTGACTAGTTTCACCACTGGTATACGAGCATCTCAGCCC
CTAGGACTTGGCTATATTAAGAGGAAAGCTGCTTCTGAGGGAGACACTGTAATTATTGGT
GATGATGTTGTGGGTACAGTGGTGGAAGTGCCTTTTCTCGCTCGTCAAATCCCTCCATCC
TAG

Peptide Sequence

PEP ID

XP_016509837.1
PEP Infomation

PREDICTED: putative transferase At1g60990, chloroplastic isoform X1 [Nicotiana tabacum]
Sequence

MIRAMAYCYGASVLFPCQSFSSSPILHLFPTPLAYRPFSYDAPPTKFKRRLSFSSAAALP
FDLSPPPIDHDLLDTMTVAGAKVSEDGAIGTFDNDEEALDAVENAVAVVDLSHYGRIRVS
GEDRVQFLHNQSTANFEILHEGQGCDTVFVTPTARTIDIAHAWIMKTAITLVISPVTKER
ITGMLKKYIFFADKVEIQDITGQTSLFVLIGPRSNQIMEALNLADVVGQPYGSHKHYSVN
GMPITVGVGNIISDEGYSLMMSPAAAESVWKALLGHGTIPMGTNAWETLRILQGRPAPGK
ELTDEFNVLEANLWNAVSLNKGCYKGQETISRLVTYDGIKQRLWGIRVSSPVEPGSTISV
DGKKVGKVTSFTTGIRASQPLGLGYIKRKAASEGDTVIIGDDVVGTVVEVPFLARQIPPS

Transcript Sequence

Gene sequence data has not been registered.